| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (34 Kb) [Save to disk]
 - Biological Unit Coordinates (109m.pdb1.gz) 30 Kb
- LPC: Ligand-Protein Contacts for 109M
- CSU: Contacts of Structural Units for 109M
- Likely Quarternary Molecular Structure file(s) for 109M
- Structure Factors (100 Kb)
- Retrieve 109M in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 109M
from S2C,
[Save to disk]
- Re-refined 109m structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
|
| View 109M in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
|
| Visual 3D analysis of 109M |
- Ramachandran
plot from PDBSum
|
| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 109M,
from MSDmotif at EBI
- Genome occurence of
109M's fold
from GeneCensus
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d109m__, region
[Jmol]
[rasmolscript]
[script source]
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
|
| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [109m_A] [109m]
- SWISS-PROT database: [P02185]
- Domain organization of [MYG_PHYCA] by SWISSPFAM
|
|
Other resources with information on 109M |
- Community annotation for 109M at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
|
| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
|
|
