157D CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS date
authors Leonard, G.A., McAuley-Hecht, K.E., Ebel, S., Lough, D.M., Brown, T., Hunter, W.N.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
Primary referenceCrystal and molecular structure of r(CGCGAAUUAGCG): an RNA duplex containing two G(anti).A(anti) base pairs., Leonard GA, McAuley-Hecht KE, Ebel S, Lough DM, Brown T, Hunter WN, Structure 1994 Jun 15;2(6):483-94. PMID:7922026
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (157d.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 157D
  • Likely Quarternary Molecular Structure file(s) for 157D
  • Structure Factors (23 Kb)
  • Retrieve 157D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 157D from S2C, [Save to disk]
  • Re-refined 157d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 157D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 157D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 157D, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [157d] [157d_A] [157d_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 157D
  • Community annotation for 157D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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