189D HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION date
authors Eisenstein, M., Shakked, Z.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
Primary referenceHydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition., Eisenstein M, Shakked Z, J Mol Biol 1995 May 5;248(3):662-78. PMID:7752232
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (7 Kb) [Save to disk]
  • Biological Unit Coordinates (189d.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 189D
  • Likely Quarternary Molecular Structure file(s) for 189D
  • Retrieve 189D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 189D from S2C, [Save to disk]
  • View 189D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 189D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 189D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [189d_A] [189d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 189D
  • Community annotation for 189D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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