1914	SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14	date
authors	Birse, D., Kapp, U., Strub, K., Cusack, S., Aberg, A.
compound		source
symmetry		R_factor R_Free 0.2990000
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.53
ligand	BME, PO4	enzyme
Gene Ontology	Chain Function Process Component 21, CQ, JJJ, JJJJ, HHH, Bo, 11, Ag, CCCC, Cg, BY, HHHH, AAAA, CA, BI, QQ, AQ, BA, AAA, Co, CC, Ao, QQQQ, OOO, JJ, OO, Aw, CI, CY, QQQ, Bg, CCC, 23, 13, OOOO, HH 3 A 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... AA, 64, 41, 53, 51, 4, 43 AI AK, AW AL AY Ak, 2e, Bk B 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... BBB BQ Bw C 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... D 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... DM E 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... F 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... G 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... H 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... I 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... J 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... K 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... L 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... Lk M 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... N 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... O 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... O8, o8 P 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... 3-deoxy-manno-octulosonate-8... PA, x Q R S T U V W X XI, Ck, 78, 88 Y Z a b c d e f g h i j k k5, Am, af, Bp, Bn, Dk, kb, zI l m n o p q r s t v w y, z
Primary reference	The crystal structure of the signal recognition particle Alu RNA binding heterodimer, SRP9/14., Birse DE, Kapp U, Strub K, Cusack S, Aberg A, EMBO J 1997 Jul 1;16(13):3757-66. PMID:9233785

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1914.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 1914 CSU: Contacts of Structural Units for 1914 Likely Quarternary Molecular Structure file(s) for 1914 Structure Factors (159 Kb) Retrieve 1914 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1914 from S2C, [Save to disk] Re-refined 1914 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1914 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1914

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1914, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lrv__, region [Jmol] [rasmolscript] [script source]     - Domain d1914_2, region 2001-2097 [Jmol] [rasmolscript] [script source]     - Domain d1coy_1, region 4-318,451-506 [Jmol] [rasmolscript] [script source]     - Domain d1914_1, region 4004-4081 [Jmol] [rasmolscript] [script source]     - Domain d3cox_1, region 5-318,451-506 [Jmol] [rasmolscript] [script source]     - Domain d1rqfa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1olza2, region A:3-480 [Jmol] [rasmolscript] [script source]     - Domain d1c9ia1, region A:331-357 [Jmol] [rasmolscript] [script source]     - Domain d1bpoa1, region A:331-487 [Jmol] [rasmolscript] [script source]     - Domain d1njwa2, region A:469-876 [Jmol] [rasmolscript] [script source]     - Domain d1e8xa1, region A:525-725 [Jmol] [rasmolscript] [script source]     - Domain d1cc2a1, region A:9-318,A:451-506 [Jmol] [rasmolscript] [script source]     - Domain d1n4va1, region A:9-318,A:451-507 [Jmol] [rasmolscript] [script source]     - Domain d1i7xb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1zakb1, region B:3-127,B:159-222 [Jmol] [rasmolscript] [script source]     - Domain d1olzb2, region B:3-480 [Jmol] [rasmolscript] [script source]     - Domain d1c9ib1, region B:331-358 [Jmol] [rasmolscript] [script source]     - Domain d1c9lb1, region B:331-359 [Jmol] [rasmolscript] [script source]     - Domain d1bpob1, region B:331-493 [Jmol] [rasmolscript] [script source]     - Domain d1bpoc1, region C:331-487 [Jmol] [rasmolscript] [script source]     - Domain d1cf1d2, region D:183-386 [Jmol] [rasmolscript] [script source]     - Domain d1g65y_, region Y [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1914_A] [1914] SWISS-PROT database: [P49962] [P16254] Domain organization of [SRP09_MOUSE] [SRP14_MOUSE] by SWISSPFAM

Other resources with information on 1914

Community annotation for 1914 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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