1A0F Transferase date Nov 29, 1997
title Crystal Structure Of Glutathione S-Transferase From Escheric Complexed With Glutathionesulfonic Acid
authors M.Nishida, S.Harada, S.Noguchi, H.Inoue, K.Takahashi, Y.Satow
compound source
Molecule: Glutathione S-Transferase
Chain: A, B
Fragment: Glutathione-Binding Domain
Synonym: Gst, Glutathione Transferase
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Escherichia Coli K12
Organism_taxid: 83333
Strain: K-12
Gene: Gst
Expression_system: Escherichia Coli K12
Expression_system_taxid: 83333
Expression_system_strain: K-12
Expression_system_plasmid: Puc18
Expression_system_gene: Gst
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.650 95.390 51.210 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GTS enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 1N2A
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106., Nishida M, Harada S, Noguchi S, Satow Y, Inoue H, Takahashi K, J Mol Biol 1998 Aug 7;281(1):135-47. PMID:9680481
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1a0f.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 1A0F
  • CSU: Contacts of Structural Units for 1A0F
  • Likely Quarternary Molecular Structure file(s) for 1A0F
  • Structure Factors (166 Kb)
  • Retrieve 1A0F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A0F from S2C, [Save to disk]
  • Re-refined 1a0f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1A0F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A0F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A0F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a0fa2, region A:1-80 [Jmol] [rasmolscript] [script source]
        - Domain d1a0fa1, region A:81-201 [Jmol] [rasmolscript] [script source]
        - Domain d1a0fb2, region B:1-80 [Jmol] [rasmolscript] [script source]
        - Domain d1a0fb1, region B:81-201 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a0f] [1a0f_B] [1a0f_A]
  • SWISS-PROT database: [P0A9D2]
  • Domain organization of [GST_ECOLI] by SWISSPFAM
  • Other resources with information on 1A0F
  • Community annotation for 1A0F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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