1A14 Complex (Antibody Antigen) date Dec 21, 1997
title Complex Between Nc10 Anti-Influenza Virus Neuraminidase Sing Antibody With A 5 Residue Linker And Influenza Virus Neuram
authors R.L.Malby, A.J.Mccoy, A.A.Kortt, P.J.Hudson, P.M.Colman
compound source
Molecule: Neuraminidase
Chain: N
Fragment: Residues 82 - 468
Ec: 3.2.1.18
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Strain: N9, Aternaustraliag70c75

Molecule: Nc10 Fv (Heavy Chain)
Chain: H
Fragment: Vh Domain Of Anti-Neuraminidase Antibody Nc10 Cov Joined By A Five-Residue Polypeptide Linker;
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Nc10 Fv (Light Chain)
Chain: L
Fragment: Vl Domain Of Anti-Neuraminidase Antibody Nc10 Cov Joined By A Five-Residue Polypeptide Linker;
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 4 2 2
R_factor 0.200 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
165.300 165.300 182.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand BMA, CA, MAN, NAG enzyme Hydrolase E.C.3.2.1.18 BRENDA
related structures by homologous chain: 15C8, 1NMB, 1NNA, 2JEL
Gene
Ontology
ChainFunctionProcessComponent
H


L


N


Primary referenceThree-dimensional structures of single-chain Fv-neuraminidase complexes., Malby RL, McCoy AJ, Kortt AA, Hudson PJ, Colman PM, J Mol Biol 1998 Jun 19;279(4):901-10. PMID:9642070
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (1a14.pdb1.gz) 401 Kb
  • LPC: Ligand-Protein Contacts for 1A14
  • CSU: Contacts of Structural Units for 1A14
  • Likely Quarternary Molecular Structure file(s) for 1A14
  • Retrieve 1A14 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A14 from S2C, [Save to disk]
  • View 1A14 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A14
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A14, from MSDmotif at EBI
  • Genome occurence of 1A14's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a14h_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1a14l_, region L [Jmol] [rasmolscript] [script source]
        - Domain d1a14n_, region N [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a14] [1a14_N] [1a14_L] [1a14_H]
  • SWISS-PROT database: [P01749] [P01645] [P03472]
  • Domain organization of [HVM05_MOUSE] [KV5AC_MOUSE] [NRAM_I75A5] by SWISSPFAM
  • Domain found in 1A14: [IGv ] by SMART
  • Other resources with information on 1A14
  • Community annotation for 1A14 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science