1A6W	Immunoglobulin	date	Mar 03, 1998
title	B1-8 Fv Fragment Complexed With A (4-Hydroxy-5-Iodo-3- Nitrophenyl) Acetate Compound
authors	T.Simon, K.Henrick, M.Hirshberg, G.Winter
compound		source
Molecule: B1-8 Fv (Light Chain) Chain: L Fragment: Fv Fragment		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: C57bl-6
Molecule: B1-8 Fv (Heavy Chain) Chain: H Fragment: Fv Fragment		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: C57bl6
symmetry	Space Group: P 21 21 21	R_factor 0.171 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.270 83.510 40.230 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	NIP	enzyme
related structures	by homologous chain: 1MFA, 1MVU, 1OAU
Gene Ontology	Chain Function Process Component L

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk] Biological Unit Coordinates (1a6w.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 1A6W CSU: Contacts of Structural Units for 1A6W Likely Quarternary Molecular Structure file(s) for 1A6W Retrieve 1A6W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1A6W from S2C, [Save to disk]

View 1A6W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1A6W

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1A6W, from MSDmotif at EBI Genome occurence of 1A6W's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1a6wh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1a6wl_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1a6w_H] [1a6w_L] [1a6w] SWISS-PROT database: [P01751] [P01724] Domain organization of [HVM07_MOUSE] [LV1B_MOUSE] by SWISSPFAM Domain found in 1A6W: [IGv ] by SMART

Other resources with information on 1A6W

Community annotation for 1A6W at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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