1A7I Lim Domain Containing Proteins date Mar 15, 1998
title Amino-Terminal Lim Domain From Quail Cysteine And Glycine-Ri Protein, Nmr, Minimized Average Structure
authors G.Kontaxis, R.Konrat, B.Kraeutler, R.Weiskirchen, K.Bister
compound source
Molecule: Qcrp2 (Lim1)
Chain: A
Fragment: N-Terminal Lim Domain
Engineered: Yes
 Organism_scientific: Coturnix Japonica
Organism_common: Japanese Quail
Organism_taxid: 93934
Gene: Csrp2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet
methodSolution NMR
ligand ZN enzyme
related structures by homologous chain: 1B8T
Primary referenceStructure and intramodular dynamics of the amino-terminal LIM domain from quail cysteine- and glycine-rich protein CRP2., Kontaxis G, Konrat R, Krautler B, Weiskirchen R, Bister K, Biochemistry 1998 May 19;37(20):7127-34. PMID:9585524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1a7i.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1A7I
  • CSU: Contacts of Structural Units for 1A7I
  • Original NMR restraints for 1A7I from PDB
  • Retrieve 1A7I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A7I from S2C, [Save to disk]
    • View 1A7I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1A7I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A7I, from MSDmotif at EBI
  • Genome occurence of 1A7I's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a7i_2, region 36-67 [Jmol] [rasmolscript] [script source]
        - Domain d1a7i_1, region 8-35 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a7i_A] [1a7i]
  • SWISS-PROT database: [Q05158]
  • Domain organization of [CSRP2_COTJA] by SWISSPFAM
  • Domain found in 1A7I: [LIM ] by SMART
    • Other resources with information on 1A7I
  • Community annotation for 1A7I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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