1A8R Hydrolase date Mar 27, 1998
title Gtp Cyclohydrolase I (H112s Mutant) In Complex With Gtp
authors G.Auerbach, H.Nar, A.Bracher, A.Bacher, R.Huber
compound source
Molecule: Gtp Cyclohydrolase I
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Ec: 3.5.4.16
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Organ: Brain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Other_details: Homologous Expression
symmetry Space Group: C 2 2 21
R_factor 0.200 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
314.950 219.140 131.410 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GTP enzyme Hydrolase E.C.3.5.4.16 BRENDA
related structures by homologous chain: 1N3S
Gene
Ontology
ChainFunctionProcessComponent
F, A, O, J, N, K, E, B, H, M, C, D, I, G, L


Primary referenceBiosynthesis of pteridines. Reaction mechanism of GTP cyclohydrolase I., Rebelo J, Auerbach G, Bader G, Bracher A, Nar H, Hosl C, Schramek N, Kaiser J, Bacher A, Huber R, Fischer M, J Mol Biol. 2003 Feb 14;326(2):503-16. PMID:12559918
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (550 Kb) [Save to disk]
  • Biological Unit Coordinates (1a8r.pdb1.gz) 364 Kb
  • Biological Unit Coordinates (1a8r.pdb2.gz) 366 Kb
  • LPC: Ligand-Protein Contacts for 1A8R
  • CSU: Contacts of Structural Units for 1A8R
  • Likely Quarternary Molecular Structure file(s) for 1A8R
  • Retrieve 1A8R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A8R from S2C, [Save to disk]
  • View 1A8R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A8R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A8R, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a8ra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1a8rb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1a8rc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1a8rd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1a8re_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1a8rf_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1a8rg_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1a8rh_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1a8ri_, region I [Jmol] [rasmolscript] [script source]
        - Domain d1a8rj_, region J [Jmol] [rasmolscript] [script source]
        - Domain d1a8rk_, region K [Jmol] [rasmolscript] [script source]
        - Domain d1a8rl_, region L [Jmol] [rasmolscript] [script source]
        - Domain d1a8rm_, region M [Jmol] [rasmolscript] [script source]
        - Domain d1a8rn_, region N [Jmol] [rasmolscript] [script source]
        - Domain d1a8ro_, region O [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a8r] [1a8r_M] [1a8r_E] [1a8r_G] [1a8r_C] [1a8r_N] [1a8r_L] [1a8r_F] [1a8r_K] [1a8r_O] [1a8r_H] [1a8r_B] [1a8r_A] [1a8r_I] [1a8r_D] [1a8r_J]
  • SWISS-PROT database: [P0A6T5]
  • Domain organization of [GCH1_ECOLI] by SWISSPFAM
  • Other resources with information on 1A8R
  • Community annotation for 1A8R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science