OCA Atlas for 1A93

1A93

Leucine Zipper

date

Apr 15, 1998

title

Nmr Solution Structure Of The C-Myc-Max Heterodimeric Leucin Nmr, Minimized Average Structure

authors

P.Lavigne, M.P.Crump, S.M.Gagne, R.S.Hodges, C.M.Kay, B.D.Sykes

compound

source

Molecule: Myc Proto-Oncogene Protein
Chain: A
Fragment: Heterodimeric Leucine Zipper
Synonym: Coiled Coil, Lz
Engineered: Yes
Other_details: Both C-Myc (Chain A) And Max (Chain B) Have Biological Cgg Linker At The N-Terminus Of The Protein;

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Max Protein
Chain: B
Fragment: Heterodimeric Leucine Zipper
Synonym: Coiled Coil, Lz
Engineered: Yes
Other_details: Both C-Myc (Chain A) And Max (Chain B) Have Biological Cgg Linker At The N-Terminus Of The Protein

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090

method

Solution NMR

ligand

ACE, NH2

enzyme

Gene
Ontology

Chain	Function	Process	Component
A
B

Primary reference

Insights into the mechanism of heterodimerization from the 1H-NMR solution structure of the c-Myc-Max heterodimeric leucine zipper., Lavigne P, Crump MP, Gagne SM, Hodges RS, Kay CM, Sykes BD, J Mol Biol 1998 Aug 7;281(1):165-81. PMID:9680483

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]

Biological Unit Coordinates (1a93.pdb1.gz) 21 Kb

LPC: Ligand-Protein Contacts for 1A93

CSU: Contacts of Structural Units for 1A93

Original NMR restraints for 1A93 from PDB

Experimental data, such as chemical shifts, at BioMagResBank (BMRB)

NMR Restraints Grid from BioMagResBank (BMRB)

Retrieve 1A93 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1A93 from S2C, [Save to disk]

View 1A93 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1A93

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 1A93, from MSDmotif at EBI

Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1a93a_, region A [Jmol] [rasmolscript] [script source]
- Domain d1a93b_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1a93_A] [1a93_B] [1a93]

SWISS-PROT database: [P28574] [P01106]

Domain organization of [MAX_MOUSE] [MYC_HUMAN] by SWISSPFAM

Other resources with information on 1A93

Community annotation for 1A93 at PDBWiki (http://pdbwiki.org)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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