1A9X CARBAMOYL PHOSPHATE SYNTHETASE: CAUGHT IN THE ACT OF GLUTAMINE HYDROLYSIS date
authors Thoden, J., Holden, H.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand ADP, CL, CYG, K, MN, NET, ORN, PO4 enzyme
related structures by homologous chain: 1CS0
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, G


F, B, H, D


Primary referenceCarbamoyl phosphate synthetase: caught in the act of glutamine hydrolysis., Thoden JB, Miran SG, Phillips JC, Howard AJ, Raushel FM, Holden HM, Biochemistry 1998 Jun 23;37(25):8825-31. PMID:9636022
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (992 Kb) [Save to disk]
  • Biological Unit Coordinates (1a9x.pdb1.gz) 976 Kb
  • Biological Unit Coordinates (1a9x.pdb2.gz) 258 Kb
  • Biological Unit Coordinates (1a9x.pdb3.gz) 252 Kb
  • Biological Unit Coordinates (1a9x.pdb4.gz) 260 Kb
  • Biological Unit Coordinates (1a9x.pdb5.gz) 258 Kb
  • LPC: Ligand-Protein Contacts for 1A9X
  • CSU: Contacts of Structural Units for 1A9X
  • Likely Quarternary Molecular Structure file(s) for 1A9X
  • Retrieve 1A9X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A9X from S2C, [Save to disk]
  • View 1A9X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A9X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A9X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a9xa3, region A:1-127 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xa5, region A:128-402 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xa1, region A:403-555 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xa4, region A:556-676 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xa6, region A:677-935 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xa2, region A:936-1073 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xb1, region B:1502-1652 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xb2, region B:1653-1880 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc3, region C:2001-2127 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc5, region C:2128-2402 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc1, region C:2403-2555 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc4, region C:2556-2676 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc6, region C:2677-2935 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xc2, region C:2936-3073 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xd1, region D:3502-3652 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xd2, region D:3653-3880 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe3, region E:4001-4127 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe5, region E:4128-4402 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe1, region E:4403-4555 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe4, region E:4556-4676 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe6, region E:4677-4935 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xe2, region E:4936-5073 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xf1, region F:5502-5652 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xf2, region F:5653-5880 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg3, region G:6001-6127 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg5, region G:6128-6402 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg1, region G:6403-6555 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg4, region G:6556-6676 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg6, region G:6677-6935 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xg2, region G:6936-7073 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xh1, region H:7502-7652 [Jmol] [rasmolscript] [script source]
        - Domain d1a9xh2, region H:7653-7880 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a9x_G] [1a9x_A] [1a9x] [1a9x_B] [1a9x_H] [1a9x_F] [1a9x_E] [1a9x_D] [1a9x_C]
  • SWISS-PROT database: [P0A6F1] [P00968]
  • Domain organization of [CARA_ECOLI] [CARB_ECOLI] by SWISSPFAM
  • Domains found in 1A9X: [CPSase_L_D3] [CPSase_sm_chain] [MGS ] by SMART
  • Other resources with information on 1A9X
  • Community annotation for 1A9X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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