1ACI Ribosomal Protein date Feb 07, 1997
title L11 Ribosomal Protein Rna Binding Domain, Nmr, 20 Structures
authors Y.Xing, D.E.Draper
compound source
Molecule: L11 Ribosomal Protein
Chain: A
Fragment: C-Terminal Domain, 76 Residues
 Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Strain: L11
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCooperative interactions of RNA and thiostrepton antibiotic with two domains of ribosomal protein L11., Xing Y, Draper DE, Biochemistry 1996 Feb 6;35(5):1581-8. PMID:8634289
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (391 Kb) [Save to disk]
  • Biological Unit Coordinates (1aci.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 1ACI
  • Retrieve 1ACI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ACI from S2C, [Save to disk]
    • View 1ACI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ACI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ACI, from MSDmotif at EBI
  • Genome occurence of 1ACI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1aci__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aci_A] [1aci]
  • SWISS-PROT database: [P56210]
  • Domain organization of [RL11_BACST] by SWISSPFAM
  • Domain found in 1ACI: [RL11 ] by SMART
    • Other resources with information on 1ACI
  • Community annotation for 1ACI at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1ACI from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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