1AGM	Hydrolase	date	May 13, 1994
title	Refined Structure For The Complex Of Acarbose With Glucoamyl Aspergillus Awamori Var. X100 To 2.4 Angstroms Resolution
authors	A.E.Aleshin, L.M.Firsov, R.B.Honzatko
compound		source
Molecule: Glucoamylase-471 Chain: A Ec: 3.2.1.3 Engineered: Yes		Organism_scientific: Aspergillus Awamori Organism_taxid: 105351
symmetry	Space Group: P 21 21 21	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.700 103.900 48.340 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	AC1, BMA, GLC, MAN, NAG	enzyme	Hydrolase E.C.3.2.1.3 BRENDA
related structures	by homologous chain: 1GLM
Gene Ontology	Chain Function Process Component A
Primary reference	Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. X100 to 2.4-A resolution., Aleshin AE, Firsov LM, Honzatko RB, J Biol Chem 1994 Jun 3;269(22):15631-9. PMID:8195212

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (1agm.pdb1.gz) 88 Kb LPC: Ligand-Protein Contacts for 1AGM CSU: Contacts of Structural Units for 1AGM Likely Quarternary Molecular Structure file(s) for 1AGM Retrieve 1AGM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AGM from S2C, [Save to disk]

View 1AGM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AGM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AGM, from MSDmotif at EBI Genome occurence of 1AGM's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1agm__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1agm_A] [1agm] SWISS-PROT database: [P69327] Domain organization of [AMYG_ASPAW] by SWISSPFAM

Other resources with information on 1AGM

Community annotation for 1AGM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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