1AJR Aminotransferase date May 08, 1997
title Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate
authors S.Rhee, M.M.Silva, C.C.Hyde, P.H.Rogers, C.M.Metzler, D.E.Metzler, A.Arnone
compound source
Molecule: Aspartate Aminotransferase
Chain: A, B
Ec: 2.6.1.1
Other_details: Lys258 Side Chain Forms The Schiff Base With Coenzyme Pyridoxal 5'-Phosphate
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
symmetry Space Group: P 21 21 21
R_factor 0.170 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
125.000 130.800 55.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.74 Å
ligand LLP enzyme Transferase E.C.2.6.1.1 BRENDA
related structures by homologous chain: 1AJS, 2CST
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRefinement and comparisons of the crystal structures of pig cytosolic aspartate aminotransferase and its complex with 2-methylaspartate., Rhee S, Silva MM, Hyde CC, Rogers PH, Metzler CM, Metzler DE, Arnone A, J Biol Chem 1997 Jul 11;272(28):17293-302. PMID:9211866
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (1ajr.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 1AJR
  • CSU: Contacts of Structural Units for 1AJR
  • Likely Quarternary Molecular Structure file(s) for 1AJR
  • Structure Factors (707 Kb)
  • Retrieve 1AJR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AJR from S2C, [Save to disk]
  • Re-refined 1ajr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AJR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AJR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AJR, from MSDmotif at EBI
  • Genome occurence of 1AJR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ajra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ajrb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ajr] [1ajr_A] [1ajr_B]
  • SWISS-PROT database: [P00503]
  • Domain organization of [AATC_PIG] by SWISSPFAM
  • Other resources with information on 1AJR
  • Community annotation for 1AJR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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