1ALH Hydrolase (Phosphoric Monoester) date Aug 23, 1994
title Kinetics And Crystal Structure Of A Mutant E. Coli Alkaline Phosphatase (Asp-369-->Asn): A Mechanism Involving One Zinc Per Active Site
authors T.T.Tibbitts, X.Xu, E.R.Kantrowitz
compound source
Molecule: Alkaline Phosphatase
Chain: A, B
Ec: 3.1.3.1
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cell_line: Sm547
Gene: Phoa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Sm547
Expression_system_plasmid: Pek209
Expression_system_gene: Phoa
symmetry Space Group: I 2 2 2
R_factor 0.189 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
194.392 167.251 76.320 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand PO4, SO4, ZN enzyme Hydrolase E.C.3.1.3.1 BRENDA
related structures by homologous chain: 1KH9, 1KHL
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • oxidoreductase activity, act...
  • hydrogenase (acceptor) activ...


  • Primary referenceKinetics and crystal structure of a mutant Escherichia coli alkaline phosphatase (Asp-369-->Asn): a mechanism involving one zinc per active site., Tibbitts TT, Xu X, Kantrowitz ER, Protein Sci 1994 Nov;3(11):2005-14. PMID:7703848
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (1alh.pdb1.gz) 175 Kb
  • LPC: Ligand-Protein Contacts for 1ALH
  • CSU: Contacts of Structural Units for 1ALH
  • Likely Quarternary Molecular Structure file(s) for 1ALH
  • Structure Factors (231 Kb)
  • Retrieve 1ALH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ALH from S2C, [Save to disk]
  • Re-refined 1alh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ALH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ALH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ALH, from MSDmotif at EBI
  • Genome occurence of 1ALH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1alha_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1alhb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1alh_B] [1alh_A] [1alh]
  • SWISS-PROT database: [P00634]
  • Domain organization of [PPB_ECOLI] by SWISSPFAM
  • Domain found in 1ALH: [alkPPc ] by SMART
  • Other resources with information on 1ALH
  • Community annotation for 1ALH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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