1AMS Transferase(Aminotransferase) date Jul 01, 1994
title X-Ray Crystallographic Study Of Pyridoxamine 5'-Phosphate-Ty Aspartate Aminotransferases From Escherichia Coli In Three
authors I.Miyahara, K.Hirotsu, H.Hayashi, H.Kagamiyama
compound source
Molecule: Aspartate Aminotransferase
Chain: A
Ec: 2.6.1.1
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.243 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
155.100 86.600 79.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand GUA, PMP enzyme Transferase E.C.2.6.1.1 BRENDA
related structures by homologous chain: 1ASG, 1CQ6
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms., Miyahara I, Hirotsu K, Hayashi H, Kagamiyama H, J Biochem (Tokyo) 1994 Nov;116(5):1001-12. PMID:7896726
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1ams.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 1AMS
  • CSU: Contacts of Structural Units for 1AMS
  • Likely Quarternary Molecular Structure file(s) for 1AMS
  • Retrieve 1AMS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AMS from S2C, [Save to disk]
  • View 1AMS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AMS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AMS, from MSDmotif at EBI
  • Genome occurence of 1AMS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ams__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ams] [1ams_A]
  • SWISS-PROT database: [P00509]
  • Domain organization of [AAT_ECOLI] by SWISSPFAM
  • Other resources with information on 1AMS
  • Community annotation for 1AMS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science