1AUV	Transferase	date	Sep 02, 1997
title	Structure Of The C Domain Of Synapsin Ia From Bovine Brain
authors	L.Esser, C.Wang, J.Deisenhofer
compound		source
Molecule: Synapsin Ia Chain: A, B Fragment: Residues 110 - 420 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Cell_line: B834 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834 (De3)
symmetry	Space Group: P 32 2 1	R_factor 0.199 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.400 76.400 180.940 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	MSE	enzyme
related structures	by homologous chain: 1PK8, 1PX2
Gene Ontology	Chain Function Process Component A, B
Primary reference	Synapsin I is structurally similar to ATP-utilizing enzymes., Esser L, Wang CR, Hosaka M, Smagula CS, Sudhof TC, Deisenhofer J, EMBO J 1998 Feb 16;17(4):977-84. PMID:9463376

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (1auv.pdb1.gz) 194 Kb LPC: Ligand-Protein Contacts for 1AUV CSU: Contacts of Structural Units for 1AUV Likely Quarternary Molecular Structure file(s) for 1AUV Retrieve 1AUV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AUV from S2C, [Save to disk]

View 1AUV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AUV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AUV, from MSDmotif at EBI Genome occurence of 1AUV's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1auva1, region A:112-213 [Jmol] [rasmolscript] [script source]     - Domain d1auva2, region A:214-417 [Jmol] [rasmolscript] [script source]     - Domain d1auvb1, region B:110-213 [Jmol] [rasmolscript] [script source]     - Domain d1auvb2, region B:214-417 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1auv] [1auv_B] [1auv_A] SWISS-PROT database: [P17599] Domain organization of [SYN1_BOVIN] by SWISSPFAM

Other resources with information on 1AUV

Community annotation for 1AUV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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