1AUW Eye Lens Protein date Sep 03, 1997
title H91n Delta 2 Crystallin From Duck
authors M.Abu-Abed, F.Vallee, P.L.Howell
compound source
Molecule: Delta 2 Crystallin
Chain: A, B, C, D
Ec: 4.3.2.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Anas Platyrhynchos
Organism_taxid: 8839
Cell_line: Bl21
Organ: Eye
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_vector_type: T7
Expression_system_plasmid: Bl21
symmetry Space Group: P 1 21 1
R_factor 0.161 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.100 100.200 109.100 90.00 102.10 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Lyase E.C.4.3.2.1 BRENDA
related structures by homologous chain: 1I0A, 1U15
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural comparison of the enzymatically active and inactive forms of delta crystallin and the role of histidine 91., Abu-Abed M, Turner MA, Vallee F, Simpson A, Slingsby C, Howell PL, Biochemistry 1997 Nov 18;36(46):14012-22. PMID:9369472
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (285 Kb) [Save to disk]
  • Biological Unit Coordinates (1auw.pdb1.gz) 281 Kb
  • CSU: Contacts of Structural Units for 1AUW
  • Likely Quarternary Molecular Structure file(s) for 1AUW
  • Structure Factors (1230 Kb)
  • Retrieve 1AUW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AUW from S2C, [Save to disk]
  • Re-refined 1auw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AUW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AUW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AUW, from MSDmotif at EBI
  • Genome occurence of 1AUW's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1auwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1auwb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1auwc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1auwd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1auw_B] [1auw_A] [1auw_C] [1auw] [1auw_D]
  • SWISS-PROT database: [P24058]
  • Domain organization of [ARLY2_ANAPL] by SWISSPFAM
  • Other resources with information on 1AUW
  • Community annotation for 1AUW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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