1AVY	Coiled Coil	date	Sep 22, 1997
title	Fibritin Deletion Mutant M (Bacteriophage T4)
authors	S.V.Strelkov, Y.Tao, V.V.Mesyanzhinov, M.G.Rossmann
compound		source
Molecule: Fibritin Chain: A, B, C Fragment: Deletion Mutant M, Residues 413 - 486 Of The Wild Synonym: Gpwac M Engineered: Yes Mutation: Yes		Organism_scientific: Enterobacteria Phage T4 Organism_taxid: 10665 Cell_line: Bl21 Gene: Wac Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet19b Expression_system_plasmid: Bl21
symmetry	Space Group: P 3	R_factor 0.220 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.680 43.680 90.610 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.85 Å
related structures	by homologous chain: 1V1H
Primary reference	Structure of bacteriophage T4 fibritin M: a troublesome packing arrangement., Strelkov SV, Tao Y, Shneider MM, Mesyanzhinov VV, Rossmann MG, Acta Crystallogr D Biol Crystallogr 1998 Sep 1;54 ( Pt 5):805-16. PMID:9757094

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk] Biological Unit Coordinates (1avy.pdb1.gz) 39 Kb Biological Unit Coordinates (1avy.pdb2.gz) 30 Kb Biological Unit Coordinates (1avy.pdb3.gz) 37 Kb CSU: Contacts of Structural Units for 1AVY Likely Quarternary Molecular Structure file(s) for 1AVY Structure Factors (100 Kb) Retrieve 1AVY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AVY from S2C, [Save to disk] Re-refined 1avy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1AVY in 3D

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Visual 3D analysis of 1AVY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AVY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1avya_, region A [Jmol] [rasmolscript] [script source]     - Domain d1avyb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1avyc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1avy_B] [1avy_A] [1avy] [1avy_C] SWISS-PROT database: [P10104] Domain organization of [WAC_BPT4] by SWISSPFAM

Other resources with information on 1AVY

Community annotation for 1AVY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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