1AZW Aminopeptidase date Nov 22, 1997
title Proline Iminopeptidase From Xanthomonas Campestris Pv. Citri
authors F.J.Medrano, J.Alonso, J.L.Garcia, A.Romero, W.Bode, F.X.Gomis-Ru
compound source
Molecule: Proline Iminopeptidase
Chain: A, B
Ec: 3.4.11.5
Engineered: Yes
Organism_scientific: Xanthomonas Citri
Organism_taxid: 346
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hb101
symmetry Space Group: C 2 2 2
R_factor 0.192 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.200 167.800 85.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand
enzyme Hydrolase E.C.3.4.11.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of proline iminopeptidase from Xanthomonas campestris pv. citri: a prototype for the prolyl oligopeptidase family., Medrano FJ, Alonso J, Garcia JL, Romero A, Bode W, Gomis-Ruth FX, EMBO J 1998 Jan 2;17(1):1-9. PMID:9427736
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (1azw.pdb1.gz) 103 Kb
  • CSU: Contacts of Structural Units for 1AZW
  • Likely Quarternary Molecular Structure file(s) for 1AZW
  • Retrieve 1AZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AZW from S2C, [Save to disk]
  • View 1AZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AZW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AZW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1azwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1azwb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1azw] [1azw_B] [1azw_A]
  • SWISS-PROT database: [P52279]
  • Domain organization of [PIP_XANCI] by SWISSPFAM
  • Other resources with information on 1AZW
  • Community annotation for 1AZW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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