1B5T Oxidoreductase date Jan 07, 1999
title Escherichia Coli Methylenetetrahydrofolate Reductase
authors B.D.Guenther, C.A.Sheppard, P.Tran, R.Rozen, R.G.Matthews, M.L.Lu
compound source
Molecule: Protein (Methylenetetrahydrofolate Reductase)
Chain: A, B, C
Ec: 1.7.99.5
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Metf
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.212 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.000 128.200 98.200 90.00 121.60 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand FAD, HG enzyme Oxidoreductase E.C.1.7.99.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe structure and properties of methylenetetrahydrofolate reductase from Escherichia coli suggest how folate ameliorates human hyperhomocysteinemia., Guenther BD, Sheppard CA, Tran P, Rozen R, Matthews RG, Ludwig ML, Nat Struct Biol 1999 Apr;6(4):359-65. PMID:10201405
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (1b5t.pdb1.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 1B5T
  • CSU: Contacts of Structural Units for 1B5T
  • Likely Quarternary Molecular Structure file(s) for 1B5T
  • Retrieve 1B5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B5T from S2C, [Save to disk]
  • View 1B5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1B5T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1B5T, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b5ta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1b5tb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1b5tc_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b5t_A] [1b5t_C] [1b5t] [1b5t_B]
  • SWISS-PROT database: [P0AEZ1]
  • Domain organization of [METF_ECOLI] by SWISSPFAM
  • Other resources with information on 1B5T
  • Community annotation for 1B5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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