1BA3 Oxidoreductase date Apr 21, 1998
title Firefly Luciferase In Complex With Bromoform
authors N.P.Franks, A.Jenkins, E.Conti, W.R.Lieb, P.Brick
compound source
Molecule: Luciferase
Chain: A
Ec: 1.13.12.7
Engineered: Yes
Organism_scientific: Photinus Pyralis
Organism_common: Common Eastern Firefly
Organism_taxid: 7054
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.197 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.560 119.560 95.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand MBR enzyme Oxidoreductase E.C.1.13.12.7 BRENDA
related structures by homologous chain: 1LCI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the inhibition of firefly luciferase by a general anesthetic., Franks NP, Jenkins A, Conti E, Lieb WR, Brick P, Biophys J 1998 Nov;75(5):2205-11. PMID:9788915
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (1ba3.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 1BA3
  • CSU: Contacts of Structural Units for 1BA3
  • Likely Quarternary Molecular Structure file(s) for 1BA3
  • Structure Factors (270 Kb)
  • Retrieve 1BA3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BA3 from S2C, [Save to disk]
  • Re-refined 1ba3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1BA3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BA3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BA3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ba3__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ba3_A] [1ba3]
  • SWISS-PROT database: [P08659]
  • Domain organization of [LUCI_PHOPY] by SWISSPFAM
  • Other resources with information on 1BA3
  • Community annotation for 1BA3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1BA3 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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