1BCF Iron Storage And Electron Transport date Dec 06, 1993
title The Structure Of A Unique, Two-Fold Symmetric, Haem-Binding
authors F.Frolow, A.J.Kalb(Gilboa), J.Yariv
compound source
Molecule: Bacterioferritin
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.208 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
211.100 211.100 145.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand HEM, MN enzyme
related structures by homologous chain: 1BFR, 1SOF
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceStructure of a unique twofold symmetric haem-binding site., Frolow F, Kalb AJ, Yariv J, Nat Struct Biol 1994 Jul;1(7):453-60. PMID:7664064
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (312 Kb) [Save to disk]
  • Biological Unit Coordinates (1bcf.pdb1.gz) 603 Kb
  • LPC: Ligand-Protein Contacts for 1BCF
  • CSU: Contacts of Structural Units for 1BCF
  • Likely Quarternary Molecular Structure file(s) for 1BCF
  • Retrieve 1BCF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BCF from S2C, [Save to disk]
  • View 1BCF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BCF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BCF, from MSDmotif at EBI
  • Genome occurence of 1BCF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bcfa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bcfb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bcf_E] [1bcf_I] [1bcf_G] [1bcf_C] [1bcf_B] [1bcf] [1bcf_D] [1bcf_A] [1bcf_K] [1bcf_J] [1bcf_H] [1bcf_L] [1bcf_F]
  • SWISS-PROT database: [P0ABD3]
  • Domain organization of [BFR_ECOLI] by SWISSPFAM
  • Other resources with information on 1BCF
  • Community annotation for 1BCF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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