1BE1 Isomerase date May 19, 1998
title Glutamate Mutase (B12-Binding Subunit), Nmr, Minimized Avera Structure
authors M.Tollinger, R.Konrat, B.H.Hilbert, E.N.G.Marsh, B.Kraeutler
compound source
Molecule: Glutamate Mutase
Chain: A
Fragment: B12-Binding Subunit
Synonym: Muts
Ec: 5.4.99.1
Engineered: Yes
Organism_scientific: Clostridium Tetanomorphum
Organism_taxid: 1553
Strain: H1
Atcc: Atcc 15920
Collection: Atcc 15920
Gene: Muts
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl12 (De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pt7-7
Expression_system_plasmid: Pmutsx
Expression_system_gene: Muts
methodSolution NMR
ligand
enzyme Isomerase E.C.5.4.99.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHow a protein prepares for B12 binding: structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium tetanomorphum., Tollinger M, Konrat R, Hilbert BH, Marsh EN, Krautler B, Structure 1998 Aug 15;6(8):1021-33. PMID:9739092
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1be1.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 1BE1
  • Retrieve 1BE1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BE1 from S2C, [Save to disk]
  • View 1BE1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BE1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BE1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1be1__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1be1] [1be1_A]
  • SWISS-PROT database: [Q05488]
  • Domain organization of [MAMA_CLOTT] by SWISSPFAM
  • Other resources with information on 1BE1
  • Community annotation for 1BE1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1BE1 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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