1BFC Growth Factor date Dec 12, 1995
title Basic Fibroblast Growth Factor Complexed With Heparin Hexame
authors S.Faham, D.C.Rees
compound source
Molecule: Basic Fibroblast Growth Factor
Chain: A
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.188 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.150 41.800 85.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand IDS, SGN, UAP enzyme
related structures by homologous chain: 1EV2, 1FGA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHeparin structure and interactions with basic fibroblast growth factor., Faham S, Hileman RE, Fromm JR, Linhardt RJ, Rees DC, Science 1996 Feb 23;271(5252):1116-20. PMID:8599088
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (1bfc.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1BFC
  • CSU: Contacts of Structural Units for 1BFC
  • Likely Quarternary Molecular Structure file(s) for 1BFC
  • Retrieve 1BFC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BFC from S2C, [Save to disk]
  • View 1BFC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BFC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BFC, from MSDmotif at EBI
  • Genome occurence of 1BFC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bfc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bfc] [1bfc_A]
  • SWISS-PROT database: [P09038]
  • Belongs to the fibroblast growth factor 2 (fgf2) family according to TCDB.
  • Domain organization of [FGF2_HUMAN] by SWISSPFAM
  • Domain found in 1BFC: [FGF ] by SMART
  • Other resources with information on 1BFC
  • Community annotation for 1BFC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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