1BHH Sh2 Domain date Jun 08, 1998
title Free P56lck Sh2 Domain
authors L.Tong, T.C.Warren, S.Lukas, J.Schembri-King, R.Betageri, J.R.Pro S.Jakes
compound source
Molecule: T-Lymphocyte-Specific Protein Tyrosine Kinase P56
Chain: A
Fragment: Sh2 Domain
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: P56 Lck Tyrosine Kinase Sh2 Domain
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.240 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.800 58.800 110.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1BHF
Primary referenceCarboxymethyl-phenylalanine as a replacement for phosphotyrosine in SH2 domain binding., Tong L, Warren TC, Lukas S, Schembri-King J, Betageri R, Proudfoot JR, Jakes S, J Biol Chem 1998 Aug 7;273(32):20238-42. PMID:9685372
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1bhh.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 1BHH
  • Likely Quarternary Molecular Structure file(s) for 1BHH
  • Retrieve 1BHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BHH from S2C, [Save to disk]
  • View 1BHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BHH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BHH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bhha_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bhhb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bhh] [1bhh_B] [1bhh_A]
  • SWISS-PROT database: [P06239]
  • Domain organization of [LCK_HUMAN] by SWISSPFAM
  • Domain found in 1BHH: [SH2 ] by SMART
  • Other resources with information on 1BHH
  • Community annotation for 1BHH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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