1BNA STRUCTURE OF A B-DNA DODECAMER. CONFORMATION AND DYNAMICS date
authors Drew, H.R., Wing, R.M., Takano, T., Broka, C., Tanaka, S., Itakura, K., Dickerson, R.E.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
note 1BNA (Molecule of the Month:pdb23)
Primary referenceStructure of a B-DNA dodecamer: conformation and dynamics., Drew HR, Wing RM, Takano T, Broka C, Tanaka S, Itakura K, Dickerson RE, Proc Natl Acad Sci U S A 1981 Apr;78(4):2179-83. PMID:6941276
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1bna.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1BNA
  • Likely Quarternary Molecular Structure file(s) for 1BNA
  • Structure Factors (57 Kb)
  • Retrieve 1BNA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BNA from S2C, [Save to disk]
  • Re-refined 1bna structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1BNA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BNA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BNA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bna_B] [1bna] [1bna_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1BNA
  • Community annotation for 1BNA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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