1BNO	Nucleotidyltransferase (Dna-Binding)	date	Apr 25, 1996
title	Nmr Solution Structure Of The N-Terminal Domain Of Dna Polym Beta, Minimized Average Structure
authors	D.J.Liu, R.Prasad, S.H.Wilson, E.F.Derose, G.P.Mullen
compound		source
Molecule: Dna Polymerase Beta Chain: A Fragment: N-Terminal Domain, Residues 1 - 87 Ec: 2.7.7.7 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Bacterial Expression_system_plasmid: Prset-8k
method	Solution NMR
ligand		enzyme	Transferase E.C.2.7.7.7 BRENDA
Primary reference	Three-dimensional solution structure of the N-terminal domain of DNA polymerase beta and mapping of the ssDNA interaction interface., Liu D, Prasad R, Wilson SH, DeRose EF, Mullen GP, Biochemistry 1996 May 21;35(20):6188-200. PMID:8639559

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (1bno.pdb1.gz) 26 Kb CSU: Contacts of Structural Units for 1BNO Original NMR restraints for 1BNO from PDB Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1BNO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BNO from S2C, [Save to disk]

View 1BNO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BNO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BNO, from MSDmotif at EBI Genome occurence of 1BNO's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1bno__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1bno] [1bno_A] SWISS-PROT database: [P06766] Domain organization of [DPOLB_RAT] by SWISSPFAM Domain found in 1BNO: [HhH1 ] by SMART

Other resources with information on 1BNO

Community annotation for 1BNO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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