1BO5	Transferase	date	Aug 10, 1998
title	Crystal Structure Of The Complex Between Escherichia Coli Gl Kinase And The Allosteric Regulator Fructose 1,6-Bisphospha
authors	M.Ormo, C.E.Bystrom, S.J.Remington
compound		source
Molecule: Protein (Glycerol Kinase) Chain: O, Z Ec: 2.7.1.30 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Pet Expression_system_vector: Pet28b Expression_system_plasmid: Gkwt(Pet28b)
symmetry	Space Group: P 41 21 2	R_factor 0.211 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 169.410 169.410 204.676 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	FBP, GOL	enzyme	Transferase E.C.2.7.1.30 BRENDA
Gene Ontology	Chain Function Process Component Z, O
Primary reference	Crystal structure of a complex of Escherichia coli glycerol kinase and an allosteric effector fructose 1,6-bisphosphate., Ormo M, Bystrom CE, Remington SJ, Biochemistry 1998 Nov 24;37(47):16565-72. PMID:9843423

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk] Biological Unit Coordinates (1bo5.pdb1.gz) 155 Kb Biological Unit Coordinates (1bo5.pdb2.gz) 307 Kb Biological Unit Coordinates (1bo5.pdb3.gz) 156 Kb Biological Unit Coordinates (1bo5.pdb4.gz) 154 Kb LPC: Ligand-Protein Contacts for 1BO5 CSU: Contacts of Structural Units for 1BO5 Likely Quarternary Molecular Structure file(s) for 1BO5 Structure Factors (502 Kb) Retrieve 1BO5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BO5 from S2C, [Save to disk] Re-refined 1bo5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1BO5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BO5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BO5, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1bo5o1, region O:2-253 [Jmol] [rasmolscript] [script source]     - Domain d1bo5o2, region O:254-499 [Jmol] [rasmolscript] [script source]     - Domain d1bo5z1, region Z:2-253 [Jmol] [rasmolscript] [script source]     - Domain d1bo5z2, region Z:254-499 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1bo5_Z] [1bo5_O] [1bo5] SWISS-PROT database: [P0A6F3] Domain organization of [GLPK_ECOLI] by SWISSPFAM

Other resources with information on 1BO5

Community annotation for 1BO5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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