1BO6 Transferase date Aug 10, 1998
title Estrogen Sulfotransferase With Inactive Cofactor Pap And Van
authors Y.Kakuta, M.Negishi, L.C.Pedersen
compound source
Molecule: Estrogen Sulfotransferase
Chain: A, B
Synonym: Est
Ec: 2.8.2.4
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Strain: C57bl-Ksj-Db-Db
Organ: Testis
Tissue: Whole Testis
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Plasmid
Expression_system_vector: Escherichia Coli
Expression_system_plasmid: Pgex-4t3
symmetry Space Group: P 21 21 2
R_factor 0.207 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.292 78.909 80.362 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand A3P, VO4 enzyme Transferase E.C.2.8.2.4 BRENDA
related structures by homologous chain: 1HY3
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe sulfuryl transfer mechanism. Crystal structure of a vanadate complex of estrogen sulfotransferase and mutational analysis., Kakuta Y, Petrotchenko EV, Pedersen LC, Negishi M, J Biol Chem. 1998 Oct 16;273(42):27325-30. PMID:9765259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (1bo6.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 1BO6
  • CSU: Contacts of Structural Units for 1BO6
  • Likely Quarternary Molecular Structure file(s) for 1BO6
  • Retrieve 1BO6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BO6 from S2C, [Save to disk]
  • View 1BO6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BO6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BO6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bo6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bo6b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bo6_B] [1bo6_A] [1bo6]
  • SWISS-PROT database: [P49891]
  • Domain organization of [ST1E1_MOUSE] by SWISSPFAM
  • Other resources with information on 1BO6
  • Community annotation for 1BO6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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