1BR8	Blood Clotting	date	Aug 26, 1998
title	Implications For Function And Therapy Of A 2.9a Structure Of Complexed Antithrombin
authors	R.Skinner, W.S.W.Chang, L.Jin, X.Y.Pei, J.A.Huntington, J.P.Abrah R.W.Carrell, D.A.Lomas
compound		source
Molecule: Protein (Antithrombin-III) Chain: L, I		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: 1q23-25 Tissue: Plasma
Molecule: Protein (Peptide) Chain: P Engineered: Yes		Synthetic: Yes Other_details: Peptide Was Chemically Synthesized.
symmetry	Space Group: P 1 21 1	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 69.120 101.690 87.020 90.00 104.36 90.00
method	X-Ray Diffraction	resolution	2.90 Å
related structures	by homologous chain: 1ANT, 1AZX
Gene Ontology	Chain Function Process Component I, L
Primary reference	Implications for function and therapy of a 2.9 A structure of binary-complexed antithrombin., Skinner R, Chang WS, Jin L, Pei X, Huntington JA, Abrahams JP, Carrell RW, Lomas DA, J Mol Biol 1998;283(1):9-14. PMID:9761669

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk] Biological Unit Coordinates (1br8.pdb1.gz) 65 Kb Biological Unit Coordinates (1br8.pdb2.gz) 68 Kb Biological Unit Coordinates (1br8.pdb3.gz) 131 Kb CSU: Contacts of Structural Units for 1BR8 Likely Quarternary Molecular Structure file(s) for 1BR8 Retrieve 1BR8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BR8 from S2C, [Save to disk]

View 1BR8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BR8

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BR8, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1br8i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1br8l_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1br8_P] [1br8_L] [1br8] [1br8_I] SWISS-PROT database: [P01008] Domain organization of [ANT3_HUMAN] by SWISSPFAM Domain found in 1BR8: [SERPIN ] by SMART

Other resources with information on 1BR8

Community annotation for 1BR8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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