1BSX Hormone Growth Factor date Aug 31, 1998
title Structure And Specificity Of Nuclear Receptor-Coactivator In
authors R.L.Wagner, B.D.Darimont, J.W.Apriletti, M.R.Stallcup, P.J.Kushn J.D.Baxter, R.J.Fletterick, K.R.Yamamoto
compound source
Molecule: Protein (Thyroid Hormone Receptor Beta)
Chain: A, B
Fragment: Ligand Binding Domain
Engineered: Yes
Other_details: His-Tagged (The Following Residues Were Not
The Electron Density: Mgsshhhhhhssglvprgshm)
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_plasmid: Pet28

Molecule: Protein (Grip1)
Chain: X, Y
Fragment: Nr-Box2 From Nuclear Receptor Interaction Domain
Synonym: Mtif2
Engineered: Yes

Synthetic: Yes
symmetry Space Group: P 31 2 1
R_factor 0.249 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.200 95.200 137.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.70 Å
ligand T3 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and specificity of nuclear receptor-coactivator interactions., Darimont BD, Wagner RL, Apriletti JW, Stallcup MR, Kushner PJ, Baxter JD, Fletterick RJ, Yamamoto KR, Genes Dev 1998 Nov 1;12(21):3343-56. PMID:9808622
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (1bsx.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (1bsx.pdb2.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1BSX
  • CSU: Contacts of Structural Units for 1BSX
  • Likely Quarternary Molecular Structure file(s) for 1BSX
  • Retrieve 1BSX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BSX from S2C, [Save to disk]
  • View 1BSX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BSX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BSX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bsxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bsxb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bsx] [1bsx_A] [1bsx_X] [1bsx_Y] [1bsx_B]
  • SWISS-PROT database: [P10828]
  • Domain organization of [THB_HUMAN] by SWISSPFAM
  • Domain found in 1BSX: [HOLI ] by SMART
  • Other resources with information on 1BSX
  • Community annotation for 1BSX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science