1BUQ Isomerase date Sep 04, 1998
title Solution Structure Of Delta-5-3-Ketosteroid Isomerase Comple The Steroid 19-Nortestosterone-Hemisuccinate
authors M.A.Massiah, C.Abeygunawardana, A.G.Gittis, A.S.Mildvan
compound source
Molecule: Protein (3-Ketosteroid Isomerase-19-Nortestostero Hemisuccinate);
Chain: A, B
Synonym: Ksi
Ec: 5.3.3.1
Engineered: Yes
Mutation: Yes
Other_details: Ksi Complexed With 19-Nortestosterone-Hemisu Substrate Analog.
Organism_scientific: Comamonas Testosteroni
Organism_taxid: 285
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21de3
Expression_system_vector_type: Bacterial
Expression_system_vector: E.Coli
Expression_system_plasmid: Pet-25b
Other_details: Pet-25b+Gene
methodSolution NMR
ligand NTH enzyme Isomerase E.C.5.3.3.1 BRENDA
related structures by homologous chain: 1ISK
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSolution structure of Delta 5-3-ketosteroid isomerase complexed with the steroid 19-nortestosterone hemisuccinate., Massiah MA, Abeygunawardana C, Gittis AG, Mildvan AS, Biochemistry 1998 Oct 20;37(42):14701-12. PMID:9778345
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (971 Kb) [Save to disk]
  • Biological Unit Coordinates (1buq.pdb1.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 1BUQ
  • CSU: Contacts of Structural Units for 1BUQ
  • Original NMR restraints for 1BUQ from PDB
  • Retrieve 1BUQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BUQ from S2C, [Save to disk]
  • View 1BUQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BUQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BUQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1buqa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1buqb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1buq_A] [1buq] [1buq_B]
  • SWISS-PROT database: [P00947]
  • Domain organization of [SDIS_COMTE] by SWISSPFAM
  • Other resources with information on 1BUQ
  • Community annotation for 1BUQ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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