1BWY Lipid Binding Protein date Sep 29, 1998
title Nmr Study Of Bovine Heart Fatty Acid Binding Protein
authors D.Lassen, C.Luecke, M.Kveder, A.Mesgarzadeh, J.M.Schmidt, B.Spech A.Lezius, F.Spener, H.Rueterjans
compound source
Molecule: Protein (Heart Fatty Acid Binding Protein)
Chain: A
Synonym: H-Fabp, Mammary Derived Growth Inhibitor, Mdgi
Engineered: Yes
Other_details: Pi 5.1 Isoform, Holo Protein
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Strain: Bl21 (De3) Plyss
Organ: Heart
Tissue: Heart Muscle
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pet-3d
methodSolution NMR
related structures by homologous chain: 1JJX
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of bovine heart fatty-acid-binding protein with bound palmitic acid, determined by multidimensional NMR spectroscopy., Lassen D, Lucke C, Kveder M, Mesgarzadeh A, Schmidt JM, Specht B, Lezius A, Spener F, Ruterjans H, Eur J Biochem 1995 May 15;230(1):266-80. PMID:7601110
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (836 Kb) [Save to disk]
  • Biological Unit Coordinates (1bwy.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 1BWY
  • Retrieve 1BWY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BWY from S2C, [Save to disk]
    • View 1BWY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BWY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BWY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bwya_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bwy] [1bwy_A]
  • SWISS-PROT database: [P10790]
  • Domain organization of [FABPH_BOVIN] by SWISSPFAM
    • Other resources with information on 1BWY
  • Community annotation for 1BWY at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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