1BXN	Lyase	date	Oct 06, 1998
title	The Crystal Structure Of Rubisco From Alcaligenes Eutrophus Angstroms.
authors	S.Hansen, V.B.Vollan, E.Hough, K.Andersen
compound		source
Molecule: Protein (Ribulose Bisphosphate Carboxylase Large Chain: A, C, E, G Synonym: Rubisco Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Cupriavidus Necator Organism_taxid: 106590
Molecule: Protein (Ribulose Bisphosphate Carboxylase Small Chain: I, J, K, L Synonym: Rubisco Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Cupriavidus Necator Organism_taxid: 106590
symmetry	Space Group: P 43 21 2	R_factor 0.266 R_Free 0.322
crystal cell	length a length b length c angle alpha angle beta angle gamma 112.000 112.000 402.700 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	PO4	enzyme	Lyase E.C.4.1.1.39 BRENDA
related structures	by homologous chain: 1IWA
Gene Ontology	Chain Function Process Component A, E, C, G J, K, I, L
Primary reference	The crystal structure of rubisco from Alcaligenes eutrophus reveals a novel central eight-stranded beta-barrel formed by beta-strands from four subunits., Hansen S, Vollan VB, Hough E, Andersen K, J Mol Biol 1999 May 14;288(4):609-21. PMID:10329167

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (335 Kb) [Save to disk] Biological Unit Coordinates (1bxn.pdb1.gz) 653 Kb LPC: Ligand-Protein Contacts for 1BXN CSU: Contacts of Structural Units for 1BXN Likely Quarternary Molecular Structure file(s) for 1BXN Structure Factors (704 Kb) Retrieve 1BXN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BXN from S2C, [Save to disk] Re-refined 1bxn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1BXN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BXN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BXN, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1bxna1, region A:151-467 [Jmol] [rasmolscript] [script source]     - Domain d1bxna2, region A:22-150 [Jmol] [rasmolscript] [script source]     - Domain d1bxnc1, region C:151-467 [Jmol] [rasmolscript] [script source]     - Domain d1bxnc2, region C:22-150 [Jmol] [rasmolscript] [script source]     - Domain d1bxne1, region E:151-467 [Jmol] [rasmolscript] [script source]     - Domain d1bxne2, region E:22-150 [Jmol] [rasmolscript] [script source]     - Domain d1bxng1, region G:151-467 [Jmol] [rasmolscript] [script source]     - Domain d1bxng2, region G:22-150 [Jmol] [rasmolscript] [script source]     - Domain d1bxni_, region I [Jmol] [rasmolscript] [script source]     - Domain d1bxnj_, region J [Jmol] [rasmolscript] [script source]     - Domain d1bxnk_, region K [Jmol] [rasmolscript] [script source]     - Domain d1bxnl_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1bxn] [1bxn_E] [1bxn_A] [1bxn_L] [1bxn_G] [1bxn_I] [1bxn_K] [1bxn_C] [1bxn_J] SWISS-PROT database: [P0C2C2] [P09658] Domain organization of [RBL1C_RALEU] [RBSC_RALEU] by SWISSPFAM Domain found in 1BXN: [RuBisCO_small ] by SMART

Other resources with information on 1BXN

Community annotation for 1BXN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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