1BXV Copper Protein date Oct 09, 1998
title Reduced Plastocyanin From Synechococcus Sp.
authors T.Inoue, H.Sugawara, S.Hamanaka, H.Tsukui, E.Suzuki, T.Kohzuma, Y.
compound source
Molecule: Plastocyanin
Chain: A
Engineered: Yes
Other_details: Reduced Form
 Organism_scientific: Synechococcus Elongatus
Organism_taxid: 1140
Strain: Pcc 7942
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41
R_factor 0.162 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.060 43.060 57.040 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CU enzyme
related structures by homologous chain: 1BXU
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceCrystal structure determinations of oxidized and reduced plastocyanin from the cyanobacterium Synechococcus sp. PCC 7942., Inoue T, Sugawara H, Hamanaka S, Tsukui H, Suzuki E, Kohzuma T, Kai Y, Biochemistry 1999 May 11;38(19):6063-9. PMID:10320332
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (1bxv.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1BXV
  • CSU: Contacts of Structural Units for 1BXV
  • Likely Quarternary Molecular Structure file(s) for 1BXV
  • Structure Factors (62 Kb)
  • Retrieve 1BXV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BXV from S2C, [Save to disk]
  • Re-refined 1bxv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1BXV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BXV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BXV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bxva_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bxv_A] [1bxv]
  • SWISS-PROT database: [P55020]
  • Domain organization of [PLAS_SYNE7] by SWISSPFAM
    • Other resources with information on 1BXV
  • Community annotation for 1BXV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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