1BZB Hormone Growth Factor date Oct 27, 1998
title Glycosylated Eel Calcitonin
authors Y.Hashimoto, K.Toma, J.Nishikido, K.Yamamoto, K.Haneda, T.Inazu, K.Valentine, S.J.Opella
compound source
Molecule: Protein (Calcitonin)
Chain: A
Engineered: Yes
Other_details: Synthetically Glycosylated At Asn3
 Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Anguilla J (Japanese Eel)
methodSolution NMR
ligand MAN, NAG, NH2 enzyme
note 1BZB is a representative structure
related structures by homologous chain: 1BYV
Gene
Ontology
ChainFunctionProcessComponent
A
  • hormone activity


    • Primary referenceEffects of glycosylation on the structure and dynamics of eel calcitonin in micelles and lipid bilayers determined by nuclear magnetic resonance spectroscopy., Hashimoto Y, Toma K, Nishikido J, Yamamoto K, Haneda K, Inazu T, Valentine KG, Opella SJ, Biochemistry 1999 Jun 29;38(26):8377-84. PMID:10387083
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (1bzb.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 1BZB
  • CSU: Contacts of Structural Units for 1BZB
  • Original NMR restraints for 1BZB from PDB
  • Retrieve 1BZB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BZB from S2C, [Save to disk]
    • View 1BZB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BZB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BZB, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bzba_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bzb] [1bzb_A]
  • SWISS-PROT database: [P01262]
  • Domain organization of [CALC_ANGJA] by SWISSPFAM
  • Domain found in 1BZB: [CALCITONIN ] by SMART
    • Other resources with information on 1BZB
  • Community annotation for 1BZB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1BZB from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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