1CCZ	Glycoprotein	date	Mar 02, 1999
title	Crystal Structure Of The Cd2-Binding Domain Of Cd58 (Lymphoc Function-Associated Antigen 3) At 1.8-A Resolution
authors	S.Ikemizu, L.M.Sparks, P.A.Van Der Merwe, K.Harlos, D.I.Stuart, E S.J.Davis
compound		source
Molecule: Protein (Cd58) Chain: A Fragment: Cd2-Binding Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
symmetry	Space Group: P 32 2 1	R_factor 0.202 R_Free 0.243
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.430 116.430 51.520 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	NAG	enzyme
related structures	by homologous chain: 1CI5
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the CD2-binding domain of CD58 (lymphocyte function-associated antigen 3) at 1.8-A resolution., Ikemizu S, Sparks LM, van der Merwe PA, Harlos K, Stuart DI, Jones EY, Davis SJ, Proc Natl Acad Sci U S A 1999 Apr 13;96(8):4289-94. PMID:10200255

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk] Biological Unit Coordinates (1ccz.pdb1.gz) 34 Kb LPC: Ligand-Protein Contacts for 1CCZ CSU: Contacts of Structural Units for 1CCZ Likely Quarternary Molecular Structure file(s) for 1CCZ Retrieve 1CCZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1CCZ from S2C, [Save to disk]

View 1CCZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1CCZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1CCZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ccza1, region A:1-93 [Jmol] [rasmolscript] [script source]     - Domain d1ccza2, region A:94-171 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ccz] [1ccz_A] SWISS-PROT database: [P19256] Domain organization of [LFA3_HUMAN] by SWISSPFAM Domain found in 1CCZ: [IG ] by SMART

Other resources with information on 1CCZ

Community annotation for 1CCZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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