1CEV Hydrolase date Mar 12, 1999
title Arginase From Bacillus Caldovelox, Native Structure At Ph 5.
authors M.C.Bewley, P.D.Jeffrey, M.L.Patchett, Z.F.Kanyo, E.N.Baker
compound source
Molecule: Protein (Arginase)
Chain: A, B, C, D, E, F
Ec: 3.5.3.1
Engineered: Yes
Organism_scientific: Bacillus Caldovelox
Organism_taxid: 33931
Strain: Bacillus Species Dsm 411
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21
Other_details: Bacillus Species Dsm 411
symmetry Space Group: P 21 21 21
R_factor 0.205 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.600 145.600 155.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand MN enzyme Hydrolase E.C.3.5.3.1 BRENDA
related structures by homologous chain: 3CEV, 5CEV
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceCrystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily., Bewley MC, Jeffrey PD, Patchett ML, Kanyo ZF, Baker EN, Structure Fold Des 1999 Apr 15;7(4):435-48. PMID:10196128
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]
  • Biological Unit Coordinates (1cev.pdb1.gz) 270 Kb
  • Biological Unit Coordinates (1cev.pdb2.gz) 269 Kb
  • LPC: Ligand-Protein Contacts for 1CEV
  • CSU: Contacts of Structural Units for 1CEV
  • Likely Quarternary Molecular Structure file(s) for 1CEV
  • Retrieve 1CEV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CEV from S2C, [Save to disk]
  • View 1CEV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CEV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CEV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ceva_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cevb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1cevc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1cevd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ceve_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1cevf_, region F [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cev_D] [1cev_C] [1cev] [1cev_B] [1cev_F] [1cev_A] [1cev_E]
  • SWISS-PROT database: [P53608]
  • Domain organization of [ARGI_BACCD] by SWISSPFAM
  • Other resources with information on 1CEV
  • Community annotation for 1CEV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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