1CFV	Immunoglobulin	date	Apr 11, 1997
title	Monoclonal Antibody Fragment Fv4155 From E. Coli
authors	C.H.Trinh, S.E.V.Phillips
compound		source
Molecule: Monoclonal Antibody Fv4155 Chain: L Fragment: Fv Fragment Synonym: Fv4155 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Monoclonal Antibody Fv4155 Chain: H Fragment: Fv Fragment Synonym: Fv4155 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 4 21 2	R_factor 0.178 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.000 90.000 59.600 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	E3G, ZN	enzyme
related structures	by homologous chain: 1A3R, 1BFV, 1JTT, 1MJJ
Gene Ontology	Chain Function Process Component H L
Primary reference	Antibody fragment Fv4155 bound to two closely related steroid hormones: the structural basis of fine specificity., Trinh CH, Hemmington SD, Verhoeyen ME, Phillips SE, Structure 1997 Jul 15;5(7):937-48. PMID:9261086

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (1cfv.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 1CFV CSU: Contacts of Structural Units for 1CFV Likely Quarternary Molecular Structure file(s) for 1CFV Structure Factors (109 Kb) Retrieve 1CFV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1CFV from S2C, [Save to disk] Re-refined 1cfv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1CFV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1CFV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1CFV, from MSDmotif at EBI Genome occurence of 1CFV's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1cfvh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1cfvl_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1cfv_L] [1cfv] [1cfv_H] SWISS-PROT database: [P01631] Domain organization of [KV2A7_MOUSE] by SWISSPFAM Domain found in 1CFV: [IGv ] by SMART

Other resources with information on 1CFV

Community annotation for 1CFV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1CFV from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---