1CG7 Dna Binding Protein date Mar 27, 1999
title Hmg Protein Nhp6a From Saccharomyces Cerevisiae
authors F.H.T.Allain, Y.M.Yen, J.E.Masse, P.Schultze, T.Dieckmann, R.C.Jo J.Feigon
compound source
Molecule: Protein (Non Histone Protein 6 A)
Chain: A
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
related structures by homologous chain: 1J5N, 1LWM
Gene
Ontology
ChainFunctionProcessComponent
A
  • MutSalpha complex binding


  • Primary referenceSolution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding., Allain FH, Yen YM, Masse JE, Schultze P, Dieckmann T, Johnson RC, Feigon J, EMBO J 1999 May 4;18(9):2563-79. PMID:10228169
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (752 Kb) [Save to disk]
  • Biological Unit Coordinates (1cg7.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1CG7
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CG7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CG7 from S2C, [Save to disk]
  • View 1CG7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CG7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CG7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cg7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cg7_A] [1cg7]
  • SWISS-PROT database: [P11632]
  • Domain organization of [NHP6A_YEAST] by SWISSPFAM
  • Domain found in 1CG7: [HMG ] by SMART
  • Other resources with information on 1CG7
  • Community annotation for 1CG7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science