1CGL Hydrolase Hydrolase Inhibitor date Nov 17, 1993
title Structure Of The Catalytic Domain Of Fibroblast Collagenase With An Inhibitor
authors B.Lovejoy, A.Cleasby, A.M.Hassell, K.Longley, M.A.Luther, D.Weigl G.Mcgeehan, A.B.Mcelroy, D.Drewry, M.H.Lambert, S.R.Jordan
compound source
Molecule: Fibroblast Collagenase
Chain: A, B
Ec: 3.4.24.7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Bl21(De3)
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 64
R_factor 0.186 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.200 78.200 87.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
ligand 0ED, CA, ZN enzyme Hydrolase E.C.3.4.24.7 BRENDA
related structures by homologous chain: 1JAO
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the catalytic domain of fibroblast collagenase complexed with an inhibitor., Lovejoy B, Cleasby A, Hassell AM, Longley K, Luther MA, Weigl D, McGeehan G, McElroy AB, Drewry D, Lambert MH, et al., Science 1994 Jan 21;263(5145):375-7. PMID:8278810
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1cgl.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (1cgl.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 1CGL
  • CSU: Contacts of Structural Units for 1CGL
  • Likely Quarternary Molecular Structure file(s) for 1CGL
  • Retrieve 1CGL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CGL from S2C, [Save to disk]
  • View 1CGL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CGL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CGL, from MSDmotif at EBI
  • Genome occurence of 1CGL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cgla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cglb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cgl_C] [1cgl_B] [1cgl] [1cgl_D] [1cgl_A]
  • SWISS-PROT database: [P03956]
  • Domain organization of [MMP1_HUMAN] by SWISSPFAM
  • Domain found in 1CGL: [ZnMc ] by SMART
  • Other resources with information on 1CGL
  • Community annotation for 1CGL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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