1CHV Toxin date Mar 30, 1999
title Elucidation Of The Solution Structure Of Cardiotoxin Analogu The Taiwan Cobra (Naja Naja Atra) Venom
authors G.Jayaraman, T.K.S.Kumar, C.C.Tsai, C.Yu
compound source
Molecule: Protein (Cardiotoxin Analogue V)
Chain: S
 Organism_scientific: Naja Atra
Organism_common: Chinese Cobra
Organism_taxid: 8656
Other_details: Ctx V Obtained From The Snake (Naja Naja Atr
methodSolution NMR
related structures by homologous chain: 1CCQ, 1CRE
Gene
Ontology
ChainFunctionProcessComponent
S
  • toxin activity


    • Primary referenceElucidation of the solution structure of cardiotoxin analogue V from the Taiwan cobra (Naja naja atra)--identification of structural features important for the lethal action of snake venom cardiotoxins., Jayaraman G, Kumar TK, Tsai CC, Srisailam S, Chou SH, Ho CL, Yu C, Protein Sci 2000 Apr;9(4):637-46. PMID:10794406
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1chv.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 1CHV
  • Original NMR restraints for 1CHV from PDB
  • Retrieve 1CHV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CHV from S2C, [Save to disk]
    • View 1CHV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CHV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CHV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1chvs_, region S [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1chv_S] [1chv]
  • SWISS-PROT database: [P07525]
  • Domain organization of [CTX4B_NAJAT] by SWISSPFAM
    • Other resources with information on 1CHV
  • Community annotation for 1CHV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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