1CI8 Hydrolase date Apr 08, 1999
title Esterase Estb From Burkholderia Gladioli: An Esterase With ( Lactamase Fold.
authors U.G.Wagner, E.I.Petersen, H.Schwab, C.Kratky
compound source
Molecule: Protein (Carboxylesterase)
Chain: A, B
Synonym: Estb
Ec: 3.1.1.1
Engineered: Yes
Organism_scientific: Burkholderia Gladioli
Organism_taxid: 28095
Atcc: Ncppb1891, Atcc10248
Collection: Ncppb1891, Atcc10248
Cellular_location: Intracellular
Gene: Estb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: E. Coli K12
Expression_system_cellular_location: Intracellular
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pms470(Delta)8
symmetry Space Group: P 32 2 1
R_factor 0.184 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.922 82.922 193.460 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand IPA enzyme Hydrolase E.C.3.1.1.1 BRENDA
related structures by homologous chain: 1CI9
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEstB from Burkholderia gladioli: a novel esterase with a beta-lactamase fold reveals steric factors to discriminate between esterolytic and beta-lactam cleaving activity., Wagner UG, Petersen EI, Schwab H, Kratky C, Protein Sci 2002 Mar;11(3):467-78. PMID:11847270
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (1ci8.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 1CI8
  • CSU: Contacts of Structural Units for 1CI8
  • Likely Quarternary Molecular Structure file(s) for 1CI8
  • Retrieve 1CI8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CI8 from S2C, [Save to disk]
  • View 1CI8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CI8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CI8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ci8a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ci8b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ci8_B] [1ci8_A] [1ci8]
  • SWISS-PROT database: [Q9KX40]
  • Domain organization of [ESTB_BURGA] by SWISSPFAM
  • Other resources with information on 1CI8
  • Community annotation for 1CI8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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