1CIP Hydrolase date Apr 05, 1999
title Gi-Alpha-1 Subunit Of Guanine Nucleotide-Binding Protein Com With A Gtp Analogue
authors D.Coleman, S.Sprang
compound source
Molecule: Protein (Guanine Nucleotide-Binding Protein Alpha Subunit);
Chain: A
Synonym: Gia1, Guanine Nucleotide-Binding Protein G(I), Alp Subunit;
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pqe6
symmetry Space Group: P 32 2 1
R_factor 0.213 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.050 80.050 105.550 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.50 Å
ligand GNP, MG enzyme
related structures by homologous chain: 1SVS, 1TAD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of Gialpha1.GppNHp, autoinhibition in a galpha protein-substrate complex., Coleman DE, Sprang SR, J Biol Chem 1999 Jun 11;274(24):16669-72. PMID:10358003
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1cip.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1CIP
  • CSU: Contacts of Structural Units for 1CIP
  • Likely Quarternary Molecular Structure file(s) for 1CIP
  • Structure Factors (826 Kb)
  • Retrieve 1CIP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CIP from S2C, [Save to disk]
  • Re-refined 1cip structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CIP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CIP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1CIP from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CIP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cipa2, region A:32-60,A:182-347 [Jmol] [rasmolscript] [script source]
        - Domain d1cipa1, region A:61-181 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cip] [1cip_A]
  • SWISS-PROT database: [P10824]
  • Domain organization of [GNAI1_RAT] by SWISSPFAM
  • Domain found in 1CIP: [G_alpha ] by SMART
  • Other resources with information on 1CIP
  • Community annotation for 1CIP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1CIP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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