1CJQ Hydrolase date Apr 19, 1999
title X-Ray Crystallographic Studies Of The Denaturation Of The De Of Ribonuclease S.
authors G.S.Ratnaparkhi, R.Varadarajan
compound source
Molecule: Protein (Ribonuclease S)
Chain: A
Fragment: S Peptide
Other_details: Synthetic
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Synthetic S Peptide

Molecule: Protein (Ribonuclease S)
Chain: B
Fragment: S Protein
Synonym: Rnase S

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 31 2 1
R_factor 0.175 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.800 44.800 98.620 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand SO4 enzyme
related structures by homologous chain: 1BZQ, 1QWQ
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceX-ray crystallographic studies of the denaturation of ribonuclease S., Ratnaparkhi GS, Varadarajan R, Proteins 1999 Aug 15;36(3):282-94. PMID:10409822
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1cjq.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (1cjq.pdb2.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1CJQ
  • CSU: Contacts of Structural Units for 1CJQ
  • Likely Quarternary Molecular Structure file(s) for 1CJQ
  • Structure Factors (19 Kb)
  • Retrieve 1CJQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CJQ from S2C, [Save to disk]
  • Re-refined 1cjq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CJQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CJQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CJQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cjq.1, region A:,B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cjq_B] [1cjq] [1cjq_A]
  • SWISS-PROT database: [P61823]
  • Domain organization of [RNAS1_BOVIN] by SWISSPFAM
  • Domain found in 1CJQ: [RNAse_Pc ] by SMART
  • Other resources with information on 1CJQ
  • Community annotation for 1CJQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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