1CKJ Phosphotransferase date Aug 25, 1995
title Casein Kinase I Delta Truncation Mutant Containing Residues Complex With Bound Tungstate
authors K.L.Longenecker, P.J.Roach, T.D.Hurley
compound source
Molecule: Recombinant Casein Kinase I Delta
Chain: A, B
Ec: 2.7.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Cell_line: 293
Organ: Testes
Gene: T7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: 293
Expression_system_vector_type: T7
Expression_system_plasmid: Pet-8c
Expression_system_gene: T7
Other_details: Host Bl21(De3)
symmetry Space Group: P 21 21 21
R_factor 0.192 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.740 115.470 60.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.46 Å
ligand WO4 enzyme Transferase E.C.2.7.1 BRENDA
related structures by homologous chain: 1CKI
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure of mammalian casein kinase I: molecular basis for phosphate recognition., Longenecker KL, Roach PJ, Hurley TD, J Mol Biol 1996 Apr 5;257(3):618-31. PMID:8648628
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1ckj.pdb1.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 1CKJ
  • CSU: Contacts of Structural Units for 1CKJ
  • Likely Quarternary Molecular Structure file(s) for 1CKJ
  • Structure Factors (162 Kb)
  • Retrieve 1CKJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CKJ from S2C, [Save to disk]
  • Re-refined 1ckj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CKJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CKJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CKJ, from MSDmotif at EBI
  • Genome occurence of 1CKJ's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ckja_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ckjb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ckj] [1ckj_A] [1ckj_B]
  • SWISS-PROT database: [Q06486]
  • Domain organization of [KC1D_RAT] by SWISSPFAM
  • Domain found in 1CKJ: [STYKc ] by SMART
  • Other resources with information on 1CKJ
  • Community annotation for 1CKJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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