1CN7 Ribosome date May 26, 1999
title Yeast Ribosomal Protein L30
authors H.Mao, J.R.Willamson
compound source
Molecule: 60s Ribosomal Protein L30e
Chain: A
Synonym: Yl32, Rp73
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Organelle: Ribosome,60s Subunit
Cellular_location: Cytoplasm
Gene: Rpl30
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pmalc-L30
Expression_system_gene: L30
Other_details: Recombinant Expression As A C-Terminal Malto Binding Protein Fusion In Escherichia Coli Strain Jm109 Hos Plasmid Pmalc-30
methodSolution NMR
note 1CN7 supersedes 1CK9
related structures by homologous chain: 1CK9, 1CN8
Gene
Ontology
ChainFunctionProcessComponent
A

  • cytosolic large ribosomal su...
  • Primary referenceLocal folding coupled to RNA binding in the yeast ribosomal protein L30., Mao H, Williamson JR, J Mol Biol 1999 Sep 17;292(2):345-59. PMID:10493880
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (537 Kb) [Save to disk]
  • Biological Unit Coordinates (1cn7.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 1CN7
  • Original NMR restraints for 1CN7 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CN7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CN7 from S2C, [Save to disk]
  • View 1CN7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CN7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CN7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cn7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cn7] [1cn7_A]
  • SWISS-PROT database: [P14120]
  • Domain organization of [RL30_YEAST] by SWISSPFAM
  • Other resources with information on 1CN7
  • Community annotation for 1CN7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1CN7 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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