1CV2	Hydrolase	date	Aug 22, 1999
title	Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Pa Ut26 At 1.6 A Resolution
authors	J.Marek, J.Vevodova, J.Damborsky, I.Smatanova, L.A.Svensson, J.Ne Y.Nagata, M.Takagi
compound		source
Molecule: Haloalkane Dehalogenase Chain: A Synonym: Linb, 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene Hydro Ec: 3.8.1.5 Engineered: Yes		Organism_scientific: Sphingomonas Paucimobilis Organism_taxid: 13689 Strain: Ut26 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hb101 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmylb1
symmetry	Space Group: P 21 21 2	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.264 71.669 72.698 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.58 Å
ligand		enzyme	Hydrolase E.C.3.8.1.5 BRENDA
related structures	by homologous chain: 1IZ7, 1K63
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26., Marek J, Vevodova J, Smatanova IK, Nagata Y, Svensson LA, Newman J, Takagi M, Damborsky J, Biochemistry 2000 Nov 21;39(46):14082-6. PMID:11087355

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (1cv2.pdb1.gz) 54 Kb CSU: Contacts of Structural Units for 1CV2 Likely Quarternary Molecular Structure file(s) for 1CV2 Structure Factors (245 Kb) Retrieve 1CV2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1CV2 from S2C, [Save to disk] Re-refined 1cv2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1CV2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1CV2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1CV2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1cv2a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1cv2_A] [1cv2] SWISS-PROT database: [P51698] Domain organization of [LINB_PSEPA] by SWISSPFAM

Other resources with information on 1CV2

Community annotation for 1CV2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---