1CW6 Toxin date Aug 25, 1999
title Refined Solution Structure Of Leucocin A
authors Y.Wang, M.E.Henz, N.L.F.Gallagher, S.Chai, L.Z.Yan, A.C.Gibbs, M.E D.S.Wishart, J.C.Vederas
compound source
Molecule: Type Iia Bacteriocin Leucocin A
Chain: A
Fragment: Leucocin A-Ual 187
 Organism_scientific: Leuconostoc Gelidum
Organism_taxid: 1244
methodSolution NMR
note 1CW6 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of carnobacteriocin B2 and implications for structure-activity relationships among type IIa bacteriocins from lactic acid bacteria., Wang Y, Henz ME, Gallagher NL, Chai S, Gibbs AC, Yan LZ, Stiles ME, Wishart DS, Vederas JC, Biochemistry 1999 Nov 23;38(47):15438-47. PMID:10569926
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (1cw6.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1CW6
  • Original NMR restraints for 1CW6 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CW6 from S2C, [Save to disk]
    • View 1CW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CW6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CW6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cw6a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cw6_A] [1cw6]
  • SWISS-PROT database: [P34034]
  • Belongs to the pediocin (pediocin) family according to TCDB.
  • Domain organization of [LCCA_LEUGE] by SWISSPFAM
    • Other resources with information on 1CW6
  • Community annotation for 1CW6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1CW6 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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